SNP Profiles of GU 261   View Data

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 Key

 1234567891011121314
_Input profile
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
1._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
2._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
3._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
4._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
5._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
6._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
7._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
8._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
9._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
10._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
11._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
12._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
13._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
14._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
15._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
16._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
17._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
18._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
19._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
20._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
21._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
22._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
23._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
24._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
25._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
26._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
27._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGG_
28._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
29._GU_261_/P
CC_CCCCTTTTTTCCCCAAGGCCGGCC
30._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
31._GU_261_/P
CCGGCCCCTTTTTTCCCC_GGCCGGCC
32._RUQ_1370
_GGCCCC__TT____CCGG_
33._RUQ_1370
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
34._GU_261_/P
CCGGCCCCTTTTTTCCCCAAGGCCAGCC
35._GU_261_/P
CC_CCCCTTTTGTCCCC_GGCCGGCC
36._RUQ_1370
__CC___TT_CC_GG_GG_
37._RUQ_1370
__GG________CC_CC
38._RUQ_1370
GGGGGGGGAAAAAA__AAGGGGGGGG
 1516171819202122232425262728
_Input profile
AAGGCCCCGGGGAGCCACCCGGCCAAGG
1._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
2._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
3._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
4._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
5._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
6._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
7._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
8._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
9._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
10._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
11._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
12._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
13._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
14._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
15._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
16._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
17._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
18._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
19._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
20._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
21._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
22._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
23._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
24._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
25._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
26._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
27._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
28._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCC_GG
29._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
30._GU_261_/P
AAGG_CCGGGGAGCCACCCGGCCAAGG
31._GU_261_/P
AAGGCC_GGGGAGCCACCCGGCCAAGG
32._RUQ_1370
___CCGGGG_CCACCCGGCCAAGG
33._RUQ_1370
AAGGCCCCGGGGAACCACCCGGCCAAGG
34._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
35._GU_261_/P
AAGGCCCCGGGGAGCCACCCGGCCAAGG
36._RUQ_1370
____GGGGAA_ACCC__AA_
37._RUQ_1370
___CCCC___ACCC____
38._RUQ_1370
AAGGGGGGCCCC_GGACCCCC_AA_
 29303132333435363738    
_Input profile
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
1._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
2._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
3._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
4._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
5._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
6._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
7._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
8._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
9._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
10._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
11._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
12._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
13._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
14._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
15._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
16._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
17._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
18._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
19._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
20._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
21._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
22._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
23._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
24._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
25._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
26._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
27._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
28._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
29._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
30._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
31._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
32._RUQ_1370
_AACCGGCCAATTAA__X_XX_XX_XX_X
33._RUQ_1370
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
34._GU_261_/P
GGAACCGGCCAATTAAAAGGX_XX_XX_XX_X
35._GU_261_/P
GGAACCGGCCACTTAAAAGGX_XX_XX_XX_X
36._RUQ_1370
___GG___AA__X_XX_XX_XX_X
37._RUQ_1370
_AA_GGGGAA_AA__X_XX_XX_XX_X
38._RUQ_1370
GGAAGGGGGGAAAAAAAAGGX_XX_XX_XX_X

Input profile: GU_261_/P

 
Mars Center for Cocoa Science, Brazil
Location: 8112 6
 Dapeng Zhang, 2016

1._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 1 > FP
 Dapeng Zhang, 2016

2._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 8
 Dapeng Zhang, 2016

3._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 5
 Dapeng Zhang, 2016

4._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 4
 Dapeng Zhang, 2016

5._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 3
 Dapeng Zhang, 2016

6._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 2 > FP
 Dapeng Zhang, 2016

7._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 14 > F
 Dapeng Zhang, 2016

8._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 9
 Dapeng Zhang, 2016

9._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 16
 Dapeng Zhang, 2016

10._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 12
 Dapeng Zhang, 2016

11._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 10
 Dapeng Zhang, 2016

12._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 9
 Dapeng Zhang, 2016

13._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 6
 Dapeng Zhang, 2016

14._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 10
 Dapeng Zhang, 2016

15._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 3
 Dapeng Zhang, 2016

16._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 5
 Dapeng Zhang, 2016

17._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 20
 Dapeng Zhang, 2016

18._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 19
 Dapeng Zhang, 2016

19._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 18
 Dapeng Zhang, 2016

20._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 17
 Dapeng Zhang, 2016

21._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 16
 Dapeng Zhang, 2016

22._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 15
 Dapeng Zhang, 2016

23._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 14
 Dapeng Zhang, 2016

24._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 13
 Dapeng Zhang, 2016

25._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 12
 Dapeng Zhang, 2016

26._GU_261_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 11
 Dapeng Zhang, 2016

27._GU_261_/P

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 11 > F
 Dapeng Zhang, 2016

28._GU_261_/P

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 15
 Dapeng Zhang, 2016

29._GU_261_/P

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 8
 Dapeng Zhang, 2016

30._GU_261_/P

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 21
 Dapeng Zhang, 2016

31._GU_261_/P

identical
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 7
 Dapeng Zhang, 2016

32._GU_261_/P RUQ_1370

identical
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

33._GU_261_/P RUQ_1370

98.7 %
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

34._GU_261_/P

98.7 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 1 A X2 Y16
 Dapeng Zhang, 2016

35._GU_261_/P

97.2 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 2
 Dapeng Zhang, 2016

36._GU_261_/P RUQ_1370

96.2 %
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

37._GU_261_/P RUQ_1370

75 %
12 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

38._GU_261_/P RUQ_1370

48.5 %
33 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP150
36TcSNP144 37TcSNP32 38TcSNP25